create a sandbox, a place to store sources, compile, and develop
mkdir -p <path to sandbox>\opt\src
name: clawpack | |
channels: | |
- conda-forge | |
dependencies: | |
- python=3.11 | |
- mpich | |
- numpy | |
- scipy | |
- matplotlib | |
- vtk |
# This script is a work-in-progress. THe goal is to help others install a | |
# numerical platform for analytics and simulation. | |
# | |
# It will install the libraries needed to work with mpich in python. It also | |
# compiles OpenBLAS and uses it to build the latest release of numpy and scipy. | |
# ------------------------------------------------------------------------------ # | |
# This version uses github and bitbucket sources, alternatively you may select | |
# non-git sources, supported via wget | |
# ------------------------------------------------------------------------------ # | |
# ------------------------------------------------------------------------------ # |
#!/usr/bin/python2 | |
# Copyright (C) 2016 Sixten Bergman | |
# License WTFPL | |
# | |
# This program is free software. It comes without any warranty, to the extent | |
# permitted by applicable law. | |
# You can redistribute it and/or modify it under the terms of the Do What The | |
# Fuck You Want To Public License, Version 2, as published by Sam Hocevar. See |
#!/usr/bin/env python | |
# encoding: utf-8 | |
import numpy as np | |
from mpi4py import MPI | |
from petsc4py import PETSc | |
import os | |
timeVec1 = PETSc.Vec().createWithArray([0]) | |
timeVec2 = PETSc.Vec().createWithArray([0]) | |
timeVec3 = PETSc.Vec().createWithArray([0]) |
from clawpack.pyclaw import Solution | |
import matplotlib as mpl | |
mpl.use('Agg') | |
import matplotlib.pyplot as plt | |
import glob | |
import os | |
visdir = './_ntf' | |
def plane_cut(path='./output',cutplane='z',qn=1,outdir='results',saveq=False,saveplot=False,splitall=False,planecutplot=False): | |
if not os.path.exists(os.path.join(path,outdir)): |
#!/usr/bin/env bash | |
# | |
# @ job_name = test_pyclaw_convergence | |
# @ job_type = bluegene | |
# @ output = ./$(job_name)_$(jobid).out | |
# @ error = ./$(job_name)_$(jobid).err | |
# @ environment = COPY_ALL; | |
# @ wall_clock_limit = 24:00:00,24:00:00 | |
# @ notification = always | |
# @ bg_size = 512 |
#!/usr/bin/env python | |
# This code is originally taken from | |
# http://matplotlib.sourceforge.net/mpl_examples/pylab_examples/table_demo.py | |
# It is modified here to generate the required plot. | |
# This code was originally developed by Amal AlGhamdi | |
import matplotlib | |
from matplotlib import pyplot | |
import os | |
from pylab import * |
import sys | |
import os | |
from glob import glob | |
import pickle | |
def xmdf_write(path,pkl_base='claw.pkl',ptc_base='claw.ptc',xmf_base='claw.meta',debug=False): | |
pkl_file_name = glob(os.path.join(path,'*.pkl*')) | |
if debug: | |
print pkl_file_name |
# This is script version 3.0 - HPC & PyClaw in Mac OSX | |
# ------------------------------------------------------------------------------ # | |
# This version uses github and bitbucket sources | |
# ------------------------------------------------------------------------------ # | |
# ------------------------------------------------------------------------------ # | |
#!/bin/bash -x | |
echo -e "\n**************************************************************" | |
echo "Build a HPC system in MacOSX" | |
echo "**************************************************************" |