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plasmid02 / 2018-03-20-Staph_genomes.bib
Created March 20, 2018 13:58
BibTex library of manually curated list of scientific papers reporting (or potentially) reporting Staphylococcus aureus genome sequencing. Please let me know (tread@emory.edu) about missing articles.
% Generated by Paperpile. Check out http://paperpile.com for more information.
% BibTeX export options can be customized via Settings -> BibTeX.
@ARTICLE{Uhlemann2014-jn,
title = "Molecular tracing of the emergence, diversification, and
transmission of S. aureus sequence type 8 in a New York community",
author = "Uhlemann, Anne-Catrin and Dordel, Janina and Knox, Justin R and
Raven, Kathy E and Parkhill, Julian and Holden, Matthew T G and
Peacock, Sharon J and Lowy, Franklin D",
abstract = "During the last 2 decades, community-associated
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plasmid02 / get_pubmed_coauthors.R
Created September 28, 2016 13:59
gets coauthors over a specified time range
#Usage: get_pubmed_coauthors(auth = "mason ce", stdate= "2014", enddate = "2016")
get_pubmed_coauthors <- function(auth = "read td",stdate = "2013", enddate= "2016") {
library(RISmed)
library(dplyr)
res <- EUtilsSummary(auth, type='esearch', db='pubmed', mindate=stdate, maxdate=enddate)
fetch <- EUtilsGet(res)
a_list = NULL
for (i in 1:length(Author(fetch))){