Nicholas McGlincy nmcglincy
nmcglincy
/ callPrimer3.R
Last active
August 29, 2015 14:03
— forked from al2na/callPrimer3.R
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| #' call primer3 for a given set of DNAstringSet object | |
| #' | |
| #' @param seq DNAstring object, one DNA string for the given amplicon | |
| #' @param size_range default: '151-500' | |
| #' @param Tm melting temprature parameters default:c(55,57,58) | |
| #' @param name name of the amplicon in chr_start_end format | |
| #' @param primer3 primer3 location | |
| #' @param therme.param thermodynamic parameters folder | |
| #' @param settings text file for parameters | |
| #' @author Altuna Akalin modified Arnaud Krebs' original function |