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BIDS-models for ds000031
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{ | |
"name": "ds000031 example", | |
"description": "An example of connectivity analysis using ds000031", | |
"input": | |
{ | |
"task": "rest" | |
}, | |
"blocks": [ | |
{ | |
"level": "run", | |
"transformations": [ | |
{ | |
"name": "load_image_data", | |
"input": ["bold"], | |
"aggregate": ["mean"], | |
"mask": ["Schaefer100"], /* write proper BIDS respecting mask name */ | |
"output": ["Schaefer100*"] | |
} | |
], | |
}, | |
{ | |
"level": "session", | |
"model": | |
{ | |
"variables": [ | |
"Schaefer100*", | |
"WhiteMatter", | |
"CSF", | |
"FramewiseDisplacement", | |
"aCompCor0", | |
"aCompCor1", | |
"aCompCor2", | |
"aCompCor3", | |
"aCompCor4", | |
"aCompCor5", | |
"X", | |
"Y", | |
"Z", | |
"RotX", | |
"RotY", | |
"RotZ" | |
], | |
"options": | |
{ | |
"confounds": [ | |
"WhiteMatter", | |
"CSF", | |
"FramewiseDisplacement", | |
"aCompCor0", | |
"aCompCor1", | |
"aCompCor2", | |
"aCompCor3", | |
"aCompCor4", | |
"aCompCor5", | |
"X", | |
"Y", | |
"Z", | |
"RotX", | |
"RotY", | |
"RotZ" | |
], | |
"high_pass_filter_cutoff_secs": 128 | |
}, | |
"variances": [ | |
{ | |
"name": "session_level", | |
"groupBy": "session" | |
} | |
], | |
"software": | |
{ | |
"myconnectivitytool": | |
{ | |
"whitening": ["AR1"], /* Specify type of whitening */ | |
"clean": ["True"], /* Eliminate nuisance subspace, however your software performs this */ | |
"ConnectivityMeasure": ["correlation"] | |
} | |
} | |
} | |
} |
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