jgosmann · November 6, 2015 16:56
diff --git a/jupyter_notebook_config.py b/jupyter_notebook_config.py
 # Configuration file for ipython-notebook.

 c = get_config()
 c.IPKernelApp.matplotlib = 'inline'

 #------------------------------------------------------------------------------
 # NotebookApp configuration
 #------------------------------------------------------------------------------

 # NotebookApp will inherit config from: BaseIPythonApplication, Application

 # The url for MathJax.js.
 # c.NotebookApp.mathjax_url = ''

 # Supply extra arguments that will be passed to Jinja environment.
 # c.NotebookApp.jinja_environment_options = {}

 # The IP address the notebook server will listen on.
 # c.NotebookApp.ip = 'localhost'

 # DEPRECATED use base_url
 # c.NotebookApp.base_project_url = '/'

 # Create a massive crash report when IPython encounters what may be an internal
 # error.  The default is to append a short message to the usual traceback
 # c.NotebookApp.verbose_crash = False

 # The random bytes used to secure cookies. By default this is a new random
 # number every time you start the Notebook. Set it to a value in a config file
 # to enable logins to persist across server sessions.
 # 
 # Note: Cookie secrets should be kept private, do not share config files with
 # cookie_secret stored in plaintext (you can read the value from a file).
 # c.NotebookApp.cookie_secret = ''

 # The number of additional ports to try if the specified port is not available.
 # c.NotebookApp.port_retries = 50

 # Whether to open in a browser after starting. The specific browser used is
 # platform dependent and determined by the python standard library `webbrowser`
 # module, unless it is overridden using the --browser (NotebookApp.browser)
 # configuration option.
 # c.NotebookApp.open_browser = True

 # The notebook manager class to use.
 # c.NotebookApp.notebook_manager_class = 'notebook.services.notebooks.filenbmanager.FileNotebookManager'

 # The date format used by logging formatters for %(asctime)s
 # c.NotebookApp.log_datefmt = '%Y-%m-%d %H:%M:%S'

 # The port the notebook server will listen on.
 # c.NotebookApp.port = 8888

 # Whether to overwrite existing config files when copying
 # c.NotebookApp.overwrite = False

 # Set the Access-Control-Allow-Origin header
 # 
 # Use '*' to allow any origin to access your server.
 # 
 # Takes precedence over allow_origin_pat.
 # c.NotebookApp.allow_origin = ''

 # Whether to enable MathJax for typesetting math/TeX
 # 
 # MathJax is the javascript library IPython uses to render math/LaTeX. It is
 # very large, so you may want to disable it if you have a slow internet
 # connection, or for offline use of the notebook.
 # 
 # When disabled, equations etc. will appear as their untransformed TeX source.
 # c.NotebookApp.enable_mathjax = True

 # Use a regular expression for the Access-Control-Allow-Origin header
 # 
 # Requests from an origin matching the expression will get replies with:
 # 
 #     Access-Control-Allow-Origin: origin
 # 
 # where `origin` is the origin of the request.
 # 
 # Ignored if allow_origin is set.
 # c.NotebookApp.allow_origin_pat = ''

 # The full path to an SSL/TLS certificate file.
 # c.NotebookApp.certfile = u''

 # The base URL for the notebook server.
 # 
 # Leading and trailing slashes can be omitted, and will automatically be added.
 # c.NotebookApp.base_url = '/'

 # The directory to use for notebooks and kernels.
 # c.NotebookApp.notebook_dir = u'/Volumes/Home/blubb/.ipython/profile_default'

 # 
 # c.NotebookApp.file_to_run = ''

 # The IPython profile to use.
 # c.NotebookApp.profile = u'default'

 # paths for Javascript extensions. By default, this is just
 # IPYTHONDIR/nbextensions
 # c.NotebookApp.nbextensions_path = []

 # The Logging format template
 # c.NotebookApp.log_format = '[%(name)s]%(highlevel)s %(message)s'

 # The name of the IPython directory. This directory is used for logging
 # configuration (through profiles), history storage, etc. The default is usually
 # $HOME/.ipython. This options can also be specified through the environment
 # variable IPYTHONDIR.
 # c.NotebookApp.ipython_dir = u''

 # Set the log level by value or name.
 # c.NotebookApp.log_level = 30

 # Hashed password to use for web authentication.
 # 
 # To generate, type in a python/IPython shell:
 # 
 #   from IPython.lib import passwd; passwd()
 # 
 # The string should be of the form type:salt:hashed-password.
 # c.NotebookApp.password = u''

 # Set the Access-Control-Allow-Credentials: true header
 # c.NotebookApp.allow_credentials = False

 # Path to an extra config file to load.
 # 
 # If specified, load this config file in addition to any other IPython config.
 # c.NotebookApp.extra_config_file = u''

 # Extra paths to search for serving static files.
 # 
 # This allows adding javascript/css to be available from the notebook server
 # machine, or overriding individual files in the IPython
 # c.NotebookApp.extra_static_paths = []

 # Whether to trust or not X-Scheme/X-Forwarded-Proto and X-Real-Ip/X-Forwarded-
 # For headerssent by the upstream reverse proxy. Necessary if the proxy handles
 # SSL
 # c.NotebookApp.trust_xheaders = False

 # Whether to install the default config files into the profile dir. If a new
 # profile is being created, and IPython contains config files for that profile,
 # then they will be staged into the new directory.  Otherwise, default config
 # files will be automatically generated.
 # c.NotebookApp.copy_config_files = False

 # The full path to a private key file for usage with SSL/TLS.
 # c.NotebookApp.keyfile = u''

 # Supply overrides for the tornado.web.Application that the IPython notebook
 # uses.
 # c.NotebookApp.webapp_settings = {}

 # Specify what command to use to invoke a web browser when opening the notebook.
 # If not specified, the default browser will be determined by the `webbrowser`
 # standard library module, which allows setting of the BROWSER environment
 # variable to override it.
 c.NotebookApp.browser = u'open -a /Applications/Google\\ Chrome.app %s'

 #------------------------------------------------------------------------------
 # IPKernelApp configuration
 #------------------------------------------------------------------------------

 # IPython: an enhanced interactive Python shell.

 # IPKernelApp will inherit config from: BaseIPythonApplication, Application,
 # InteractiveShellApp

 # Run the file referenced by the PYTHONSTARTUP environment variable at IPython
 # startup.
 # c.IPKernelApp.exec_PYTHONSTARTUP = True

 # The importstring for the DisplayHook factory
 # c.IPKernelApp.displayhook_class = 'IPython.kernel.zmq.displayhook.ZMQDisplayHook'

 # Set the IP or interface on which the kernel will listen.
 # c.IPKernelApp.ip = u''

 # Pre-load matplotlib and numpy for interactive use, selecting a particular
 # matplotlib backend and loop integration.
 # c.IPKernelApp.pylab = None

 # Create a massive crash report when IPython encounters what may be an internal
 # error.  The default is to append a short message to the usual traceback
 # c.IPKernelApp.verbose_crash = False

 # The Kernel subclass to be used.
 # 
 # This should allow easy re-use of the IPKernelApp entry point to configure and
 # launch kernels other than IPython's own.
 # c.IPKernelApp.kernel_class = 'IPython.kernel.zmq.ipkernel.Kernel'

 # Run the module as a script.
 # c.IPKernelApp.module_to_run = ''

 # The date format used by logging formatters for %(asctime)s
 # c.IPKernelApp.log_datefmt = '%Y-%m-%d %H:%M:%S'

 # set the shell (ROUTER) port [default: random]
 # c.IPKernelApp.shell_port = 0

 # set the control (ROUTER) port [default: random]
 # c.IPKernelApp.control_port = 0

 # Whether to overwrite existing config files when copying
 # c.IPKernelApp.overwrite = False

 # Execute the given command string.
 # c.IPKernelApp.code_to_run = ''

 # set the stdin (ROUTER) port [default: random]
 # c.IPKernelApp.stdin_port = 0

 # Set the log level by value or name.
 # c.IPKernelApp.log_level = 30

 # lines of code to run at IPython startup.
 # c.IPKernelApp.exec_lines = []

 # Path to an extra config file to load.
 # 
 # If specified, load this config file in addition to any other IPython config.
 # c.IPKernelApp.extra_config_file = u''

 # The importstring for the OutStream factory
 # c.IPKernelApp.outstream_class = 'IPython.kernel.zmq.iostream.OutStream'

 # Whether to create profile dir if it doesn't exist
 # c.IPKernelApp.auto_create = False

 # set the heartbeat port [default: random]
 # c.IPKernelApp.hb_port = 0

 # 
 # c.IPKernelApp.transport = 'tcp'

 # redirect stdout to the null device
 # c.IPKernelApp.no_stdout = False

 # Should variables loaded at startup (by startup files, exec_lines, etc.) be
 # hidden from tools like %who?
 # c.IPKernelApp.hide_initial_ns = True

 # dotted module name of an IPython extension to load.
 # c.IPKernelApp.extra_extension = ''

 # A file to be run
 # c.IPKernelApp.file_to_run = ''

 # The IPython profile to use.
 # c.IPKernelApp.profile = u'default'

 # 
 # c.IPKernelApp.parent_appname = u''

 # kill this process if its parent dies.  On Windows, the argument specifies the
 # HANDLE of the parent process, otherwise it is simply boolean.
 # c.IPKernelApp.parent_handle = 0

 # JSON file in which to store connection info [default: kernel-<pid>.json]
 # 
 # This file will contain the IP, ports, and authentication key needed to connect
 # clients to this kernel. By default, this file will be created in the security
 # dir of the current profile, but can be specified by absolute path.
 # c.IPKernelApp.connection_file = ''

 # If true, IPython will populate the user namespace with numpy, pylab, etc. and
 # an ``import *`` is done from numpy and pylab, when using pylab mode.
 # 
 # When False, pylab mode should not import any names into the user namespace.
 # c.IPKernelApp.pylab_import_all = True

 # The name of the IPython directory. This directory is used for logging
 # configuration (through profiles), history storage, etc. The default is usually
 # $HOME/.ipython. This options can also be specified through the environment
 # variable IPYTHONDIR.
 # c.IPKernelApp.ipython_dir = u''

 # Configure matplotlib for interactive use with the default matplotlib backend.
 # c.IPKernelApp.matplotlib = None

 # ONLY USED ON WINDOWS Interrupt this process when the parent is signaled.
 # c.IPKernelApp.interrupt = 0

 # Whether to install the default config files into the profile dir. If a new
 # profile is being created, and IPython contains config files for that profile,
 # then they will be staged into the new directory.  Otherwise, default config
 # files will be automatically generated.
 # c.IPKernelApp.copy_config_files = False

 # List of files to run at IPython startup.
 # c.IPKernelApp.exec_files = []

 # Enable GUI event loop integration with any of ('glut', 'gtk', 'gtk3', 'none',
 # 'osx', 'pyglet', 'qt', 'qt4', 'tk', 'wx').
 # c.IPKernelApp.gui = None

 # A list of dotted module names of IPython extensions to load.
 # c.IPKernelApp.extensions = []

 # redirect stderr to the null device
 # c.IPKernelApp.no_stderr = False

 # The Logging format template
 # c.IPKernelApp.log_format = '[%(name)s]%(highlevel)s %(message)s'

 # set the iopub (PUB) port [default: random]
 # c.IPKernelApp.iopub_port = 0

 #------------------------------------------------------------------------------
 # ZMQInteractiveShell configuration
 #------------------------------------------------------------------------------

 # A subclass of InteractiveShell for ZMQ.

 # ZMQInteractiveShell will inherit config from: InteractiveShell

 # Use colors for displaying information about objects. Because this information
 # is passed through a pager (like 'less'), and some pagers get confused with
 # color codes, this capability can be turned off.
 # c.ZMQInteractiveShell.color_info = True

 # A list of ast.NodeTransformer subclass instances, which will be applied to
 # user input before code is run.
 # c.ZMQInteractiveShell.ast_transformers = []

 # 
 # c.ZMQInteractiveShell.history_length = 10000

 # Don't call post-execute functions that have failed in the past.
 # c.ZMQInteractiveShell.disable_failing_post_execute = False

 # Show rewritten input, e.g. for autocall.
 # c.ZMQInteractiveShell.show_rewritten_input = True

 # Set the color scheme (NoColor, Linux, or LightBG).
 # c.ZMQInteractiveShell.colors = 'LightBG'

 # 
 # c.ZMQInteractiveShell.separate_in = '\n'

 # Deprecated, use PromptManager.in2_template
 # c.ZMQInteractiveShell.prompt_in2 = '   .\\D.: '

 # 
 # c.ZMQInteractiveShell.separate_out = ''

 # Deprecated, use PromptManager.in_template
 # c.ZMQInteractiveShell.prompt_in1 = 'In [\\#]: '

 # Enable deep (recursive) reloading by default. IPython can use the deep_reload
 # module which reloads changes in modules recursively (it replaces the reload()
 # function, so you don't need to change anything to use it). deep_reload()
 # forces a full reload of modules whose code may have changed, which the default
 # reload() function does not.  When deep_reload is off, IPython will use the
 # normal reload(), but deep_reload will still be available as dreload().
 # c.ZMQInteractiveShell.deep_reload = False

 # Make IPython automatically call any callable object even if you didn't type
 # explicit parentheses. For example, 'str 43' becomes 'str(43)' automatically.
 # The value can be '0' to disable the feature, '1' for 'smart' autocall, where
 # it is not applied if there are no more arguments on the line, and '2' for
 # 'full' autocall, where all callable objects are automatically called (even if
 # no arguments are present).
 # c.ZMQInteractiveShell.autocall = 0

 # 
 # c.ZMQInteractiveShell.separate_out2 = ''

 # Deprecated, use PromptManager.justify
 # c.ZMQInteractiveShell.prompts_pad_left = True

 # 
 # c.ZMQInteractiveShell.readline_parse_and_bind = ['tab: complete', '"\\C-l": clear-screen', 'set show-all-if-ambiguous on', '"\\C-o": tab-insert', '"\\C-r": reverse-search-history', '"\\C-s": forward-search-history', '"\\C-p": history-search-backward', '"\\C-n": history-search-forward', '"\\e[A": history-search-backward', '"\\e[B": history-search-forward', '"\\C-k": kill-line', '"\\C-u": unix-line-discard']

 # Enable magic commands to be called without the leading %.
 # c.ZMQInteractiveShell.automagic = True

 # 
 # c.ZMQInteractiveShell.debug = False

 # 
 # c.ZMQInteractiveShell.object_info_string_level = 0

 # 
 # c.ZMQInteractiveShell.ipython_dir = ''

 # 
 # c.ZMQInteractiveShell.readline_remove_delims = '-/~'

 # Start logging to the default log file.
 # c.ZMQInteractiveShell.logstart = False

 # The name of the logfile to use.
 # c.ZMQInteractiveShell.logfile = ''

 # 
 # c.ZMQInteractiveShell.wildcards_case_sensitive = True

 # Save multi-line entries as one entry in readline history
 # c.ZMQInteractiveShell.multiline_history = True

 # Start logging to the given file in append mode.
 # c.ZMQInteractiveShell.logappend = ''

 # 
 # c.ZMQInteractiveShell.xmode = 'Context'

 # 
 # c.ZMQInteractiveShell.quiet = False

 # Deprecated, use PromptManager.out_template
 # c.ZMQInteractiveShell.prompt_out = 'Out[\\#]: '

 # Set the size of the output cache.  The default is 1000, you can change it
 # permanently in your config file.  Setting it to 0 completely disables the
 # caching system, and the minimum value accepted is 20 (if you provide a value
 # less than 20, it is reset to 0 and a warning is issued).  This limit is
 # defined because otherwise you'll spend more time re-flushing a too small cache
 # than working
 # c.ZMQInteractiveShell.cache_size = 1000

 # 'all', 'last', 'last_expr' or 'none', specifying which nodes should be run
 # interactively (displaying output from expressions).
 # c.ZMQInteractiveShell.ast_node_interactivity = 'last_expr'

 # Automatically call the pdb debugger after every exception.
 # c.ZMQInteractiveShell.pdb = False

 #------------------------------------------------------------------------------
 # KernelManager configuration
 #------------------------------------------------------------------------------

 # Manages a single kernel in a subprocess on this host.
 # 
 # This version starts kernels with Popen.

 # KernelManager will inherit config from: ConnectionFileMixin

 # The Popen Command to launch the kernel. Override this if you have a custom
 # kernel. If kernel_cmd is specified in a configuration file, IPython does not
 # pass any arguments to the kernel, because it cannot make any assumptions about
 # the  arguments that the kernel understands. In particular, this means that the
 # kernel does not receive the option --debug if it given on the IPython command
 # line.
 # c.KernelManager.kernel_cmd = []

 # Set the kernel's IP address [default localhost]. If the IP address is
 # something other than localhost, then Consoles on other machines will be able
 # to connect to the Kernel, so be careful!
 # c.KernelManager.ip = u''

 # 
 # c.KernelManager.transport = 'tcp'

 # Should we autorestart the kernel if it dies.
 # c.KernelManager.autorestart = False

 #------------------------------------------------------------------------------
 # ProfileDir configuration
 #------------------------------------------------------------------------------

 # An object to manage the profile directory and its resources.
 # 
 # The profile directory is used by all IPython applications, to manage
 # configuration, logging and security.
 # 
 # This object knows how to find, create and manage these directories. This
 # should be used by any code that wants to handle profiles.

 # Set the profile location directly. This overrides the logic used by the
 # `profile` option.
 # c.ProfileDir.location = u''

 #------------------------------------------------------------------------------
 # Session configuration
 #------------------------------------------------------------------------------

 # Object for handling serialization and sending of messages.
 # 
 # The Session object handles building messages and sending them with ZMQ sockets
 # or ZMQStream objects.  Objects can communicate with each other over the
 # network via Session objects, and only need to work with the dict-based IPython
 # message spec. The Session will handle serialization/deserialization, security,
 # and metadata.
 # 
 # Sessions support configurable serialization via packer/unpacker traits, and
 # signing with HMAC digests via the key/keyfile traits.
 # 
 # Parameters ----------
 # 
 # debug : bool
 #     whether to trigger extra debugging statements
 # packer/unpacker : str : 'json', 'pickle' or import_string
 #     importstrings for methods to serialize message parts.  If just
 #     'json' or 'pickle', predefined JSON and pickle packers will be used.
 #     Otherwise, the entire importstring must be used.
 # 
 #     The functions must accept at least valid JSON input, and output *bytes*.
 # 
 #     For example, to use msgpack:
 #     packer = 'msgpack.packb', unpacker='msgpack.unpackb'
 # pack/unpack : callables
 #     You can also set the pack/unpack callables for serialization directly.
 # session : bytes
 #     the ID of this Session object.  The default is to generate a new UUID.
 # username : unicode
 #     username added to message headers.  The default is to ask the OS.
 # key : bytes
 #     The key used to initialize an HMAC signature.  If unset, messages
 #     will not be signed or checked.
 # keyfile : filepath
 #     The file containing a key.  If this is set, `key` will be initialized
 #     to the contents of the file.

 # Username for the Session. Default is your system username.
 # c.Session.username = u'blubb'

 # The name of the unpacker for unserializing messages. Only used with custom
 # functions for `packer`.
 # c.Session.unpacker = 'json'

 # Threshold (in bytes) beyond which a buffer should be sent without copying.
 # c.Session.copy_threshold = 65536

 # The name of the packer for serializing messages. Should be one of 'json',
 # 'pickle', or an import name for a custom callable serializer.
 # c.Session.packer = 'json'

 # The maximum number of digests to remember.
 # 
 # The digest history will be culled when it exceeds this value.
 # c.Session.digest_history_size = 65536

 # The UUID identifying this session.
 # c.Session.session = u''

 # The digest scheme used to construct the message signatures. Must have the form
 # 'hmac-HASH'.
 # c.Session.signature_scheme = 'hmac-sha256'

 # execution key, for extra authentication.
 # c.Session.key = ''

 # Debug output in the Session
 # c.Session.debug = False

 # The maximum number of items for a container to be introspected for custom
 # serialization. Containers larger than this are pickled outright.
 # c.Session.item_threshold = 64

 # path to file containing execution key.
 # c.Session.keyfile = ''

 # Threshold (in bytes) beyond which an object's buffer should be extracted to
 # avoid pickling.
 # c.Session.buffer_threshold = 1024

 # Metadata dictionary, which serves as the default top-level metadata dict for
 # each message.
 # c.Session.metadata = {}

 #------------------------------------------------------------------------------
 # InlineBackend configuration
 #------------------------------------------------------------------------------

 # An object to store configuration of the inline backend.

 # The figure format to enable (deprecated use `figure_formats` instead)
 #c.InlineBackend.figure_format = u''

 # A set of figure formats to enable: 'png',  'retina', 'jpeg', 'svg', 'pdf'.
 c.InlineBackend.figure_formats = set(['retina', 'png'])

 # Extra kwargs to be passed to fig.canvas.print_figure.
 # 
 # Logical examples include: bbox_inches, quality (for jpeg figures), etc.
 # c.InlineBackend.print_figure_kwargs = {'bbox_inches': 'tight'}

 # Close all figures at the end of each cell.
 # 
 # When True, ensures that each cell starts with no active figures, but it also
 # means that one must keep track of references in order to edit or redraw
 # figures in subsequent cells. This mode is ideal for the notebook, where
 # residual plots from other cells might be surprising.
 # 
 # When False, one must call figure() to create new figures. This means that
 # gcf() and getfigs() can reference figures created in other cells, and the
 # active figure can continue to be edited with pylab/pyplot methods that
 # reference the current active figure. This mode facilitates iterative editing
 # of figures, and behaves most consistently with other matplotlib backends, but
 # figure barriers between cells must be explicit.
 # c.InlineBackend.close_figures = True

 # Subset of matplotlib rcParams that should be different for the inline backend.
 # c.InlineBackend.rc = {'font.size': 10, 'figure.figsize': (6.0, 4.0), 'figure.facecolor': (1, 1, 1, 0), 'savefig.dpi': 72, 'figure.subplot.bottom': 0.125, 'figure.edgecolor': (1, 1, 1, 0)}

 #------------------------------------------------------------------------------
 # MappingKernelManager configuration
 #------------------------------------------------------------------------------

 # A KernelManager that handles notebook mapping and HTTP error handling

 # MappingKernelManager will inherit config from: MultiKernelManager

 # 
 # c.MappingKernelManager.root_dir = u'/Volumes/Home/blubb/.ipython/profile_default'

 # The kernel manager class.  This is configurable to allow subclassing of the
 # KernelManager for customized behavior.
 # c.MappingKernelManager.kernel_manager_class = 'IPython.kernel.ioloop.IOLoopKernelManager'

 #------------------------------------------------------------------------------
 # NotebookManager configuration
 #------------------------------------------------------------------------------

 # Glob patterns to hide in file and directory listings.
 # c.NotebookManager.hide_globs = [u'__pycache__']

 #------------------------------------------------------------------------------
 # FileNotebookManager configuration
 #------------------------------------------------------------------------------

 # FileNotebookManager will inherit config from: NotebookManager

 # The directory name in which to keep notebook checkpoints
 # 
 # This is a path relative to the notebook's own directory.
 # 
 # By default, it is .ipynb_checkpoints
 # c.FileNotebookManager.checkpoint_dir = '.ipynb_checkpoints'

 # Glob patterns to hide in file and directory listings.
 # c.FileNotebookManager.hide_globs = [u'__pycache__']

 # Automatically create a Python script when saving the notebook.
 # 
 # For easier use of import, %run and %load across notebooks, a <notebook-
 # name>.py script will be created next to any <notebook-name>.ipynb on each
 # save.  This can also be set with the short `--script` flag.
 # c.FileNotebookManager.save_script = False

 # 
 # c.FileNotebookManager.notebook_dir = u'/Volumes/Home/blubb/.ipython/profile_default'

 #------------------------------------------------------------------------------
 # NotebookNotary configuration
 #------------------------------------------------------------------------------

 # A class for computing and verifying notebook signatures.

 # The secret key with which notebooks are signed.
 # c.NotebookNotary.secret = ''

 # The file where the secret key is stored.
 # c.NotebookNotary.secret_file = u''

 # The hashing algorithm used to sign notebooks.
 # c.NotebookNotary.algorithm = 'sha256'