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| # path to python which has pypdf(2) installed | |
| set pythonExecutable to "/usr/bin/python" | |
| # path to python script that extracts DOI | |
| set doiExtract to "/Users/XXX/path/to/pypdf_doi.py" | |
| # the PDF file that is going to be processed | |
| set pdfPath to quoted form of (POSIX path of theFile) | |
| set newPDF to theFile | |
| tell application "Finder" to set pdfName to name of theFile | |
| # start BibDesk if it is not running | |
| tell application "System Events" to set runningApps to (name of processes) | |
| if runningApps contains "BibDesk" then | |
| # do nothing | |
| else | |
| tell application "BibDesk" to activate | |
| delay 2 | |
| end if | |
| # try to extract DOI, if not found, ask to enter it manually | |
| try | |
| set theDOI to do shell script pythonExecutable & " " & doiExtract & " " & pdfPath | |
| on error | |
| tell application "System Events" | |
| display dialog "No DOI found! | |
| PDF: " & pdfName & " | |
| - Press 'OK' to open the PDF and enter DOI manually | |
| - Press 'Cancel' to delete the file" buttons ¬ | |
| {"Cancel", "OK"} default button 2 | |
| end tell | |
| if button returned of result = "OK" then | |
| tell application "Finder" to open file theFile | |
| tell application "System Events" | |
| display dialog "Enter DOI! | |
| PDF: " & pdfName default answer "" | |
| end tell | |
| set theDOI to text returned of result | |
| else if button returned of result = "Cancel" then | |
| tell application "Finder" to delete theFile | |
| return | |
| end if | |
| end try | |
| # try to add publication from DOI, if not successful, ask to enter it manually | |
| if theDOI is "" then | |
| tell application "System Events" | |
| display dialog "No DOI found or entered! | |
| PDF: " & pdfName & " | |
| - Pressing 'OK' or 'Cancel' will delete the file!" buttons ¬ | |
| {"Cancel", "OK"} default button 2 | |
| tell application "Finder" to delete theFile | |
| return | |
| end tell | |
| else | |
| tell front document of application "BibDesk" | |
| repeat | |
| set theImportPubs to import for search term theDOI | |
| if theImportPubs is not {} then | |
| exit repeat | |
| else | |
| tell application "System Events" | |
| display dialog "Failed to import publication" & " | |
| PDF: " & pdfName & " | |
| DOI: " & theDOI & " | |
| - Press 'OK' to open the PDF and enter DOI manually | |
| - Press 'Cancel' to delete the file" buttons ¬ | |
| {"Cancel", "OK"} default button 2 | |
| end tell | |
| if button returned of result = "OK" then | |
| tell application "Finder" to open file theFile | |
| tell application "System Events" | |
| display dialog "Enter DOI! | |
| PDF: " & pdfName default answer "" | |
| end tell | |
| set theDOI to text returned of result | |
| else if button returned of result = "Cancel" then | |
| tell application "Finder" to delete theFile | |
| return | |
| end if | |
| end if | |
| end repeat | |
| set theImportPub to (get item 1 of theImportPubs) | |
| add newPDF to theImportPub | |
| select theImportPub | |
| tell theImportPub | |
| auto file | |
| set pubAuthor to (value of field "Author") | |
| set pubYear to (get publication year as string) | |
| set pubTitle to (get title as string) | |
| end tell | |
| save | |
| tell application "System Events" | |
| display dialog "Successfully imported publication! | |
| Author: " & pubAuthor & " | |
| Year: " & pubYear & " | |
| Title: " & pubTitle giving up after 5 | |
| end tell | |
| end tell | |
| end if |
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