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ionox0/brass.sh

Last active January 7, 2020 18:04
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brass with singularity
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brass.sh
singularity run -B /folder/with/tumor_normal/bams:/tmp /home/johnsoni/brass/quay_io-brass_v6.3.0.simg
brass.pl -c 2 -o myout -t /tmp/tumor.bam -n /tmp/normal.bam
# causes error - why is -d required? ask Peter...
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