Created
September 25, 2013 19:11
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#!/bin/bash -e | |
#------------------------------------------------------------------------------- | |
# Default values | |
#------------------------------------------------------------------------------- | |
: ${HDF5_VERSION:=$1} | |
echo "[INFO] hdf5 '$HDF5_VERSION'" | |
: ${GCC_HOME:=} | |
if [ -z "${GCC_HOME}" ]; then | |
echo "[FATAL] \$GCC_HOME is not set" | |
exit 1 | |
fi | |
GCC_VERSION="$(gcc -dumpversion)" | |
: ${DESTDIR:=$(pwd)} | |
: ${PREFIX:=${DESTDIR}/${HDF5_VERSION}/gcc/${GCC_VERSION}} | |
: ${WORKSPACE:=${PREFIX}/workspace} | |
#------------------------------------------------------------------------------- | |
# Sanity Checks | |
#------------------------------------------------------------------------------- | |
if [ -z "${HDF5_VERSION}" ]; then | |
echo "Usage: $0 <version: x.x.x.x>" | |
exit 1 | |
fi | |
#------------------------------------------------------------------------------- | |
# Meta Information | |
#------------------------------------------------------------------------------- | |
HDF5_SRCDIR="${WORKSPACE}/hdf5-${HDF5_VERSION}" | |
HDF5_TARBALL="hdf5-${HDF5_VERSION}.tar.gz" | |
HDF5_DOWNLOAD_URL="http://www.hdfgroup.org/ftp/HDF5/current/src/${HDF5_TARBALL}" | |
#------------------------------------------------------------------------------- | |
# Workspace | |
#------------------------------------------------------------------------------- | |
mkdir -p "${WORKSPACE}" || exit 1 | |
pushd "${WORKSPACE}" || exit 1 | |
#------------------------------------------------------------------------------- | |
# [LLVM] Download and unpack | |
#------------------------------------------------------------------------------- | |
if [ ! -f "$HDF5_TARBALL" ]; then | |
echo "[INFO] Downloading HDF5 '$HDF5_DOWNLOAD_URL'" | |
wget --no-check-certificate "$HDF5_DOWNLOAD_URL" || exit 1 | |
else | |
echo "[INFO] [SKIP] hdf5 tarball already exists: '$HDF5_TARBALL'" | |
fi | |
if [ ! -d "$HDF5_SRCDIR" ]; then | |
echo "[INFO] Unpacking hdf5 tarball: '$HDF5_TARBALL'" | |
tar xvzf "$HDF5_TARBALL" || exit 1 | |
else | |
echo "[INFO] [SKIP] hdf5 source code already exists: '$HDF5_SRCDIR'" | |
fi | |
#------------------------------------------------------------------------------- | |
# Build and install | |
#------------------------------------------------------------------------------- | |
cd "${HDF5_SRCDIR}" | |
if [ ! -e "${PREFIX}/bin" ]; then | |
echo "[INFO] Configuring hdf5" | |
echo "[INFO] Installing to '$PREFIX'" | |
echo "[INFO] \$GCC_HOME='${GCC_HOME}'" | |
"${HDF5_SRCDIR}/configure" --prefix="$PREFIX" || exit 1 | |
make -j all || exit 1 | |
make -j install || exit 1 | |
# TODO: Make generic (in fact, extract into separate install script) | |
# Install SZIP | |
pushd "${WORKSPACE}" | |
wget "http://www.hdfgroup.org/ftp/lib-external/szip/2.1/src/szip-2.1.tar.gz" || exit 1 | |
tar xzvf szip-2.1.tar.gz || exit 1 | |
cd szip-2.1 || exit 1 | |
./configure --prefix="${PREFIX}" || exit 1 | |
make -j | |
make -j install | |
popd | |
# Install lapack | |
pushd "${WORKSPACE}" | |
wget "http://www.netlib.org/lapack/lapack-3.4.2.tgz" || exit 1 | |
tar xzvf lapack-3.4.2.tgz || exit 1 | |
cd lapack-3.4.2 || exit 1 | |
mkdir build || exit 1 | |
cd build || exit 1 | |
cmake ../ -DCMAKE_INSTALL_PREFIX:PATH="${PREFIX}" || exit 1 | |
make -j || exit 1 | |
make -j install || exit 1 | |
popd | |
echo "[INFO] Creating hdf5 environment setup file" | |
cat > "${PREFIX}/setup.sh" <<-EOF | |
#!/bin/bash | |
# | |
# Automatically generated by $0 on $(date) | |
export HDF5_HOME="${PREFIX}" | |
export PATH="\${HDF5_HOME}/bin:\${PATH}" | |
export HDF5_GCC_HOME="${GCC_HOME}" | |
EOF | |
#----------------------------------------------- | |
# Set Permissions | |
#----------------------------------------------- | |
echo "[INFO] Setting group permissions of '${PREFIX}'" | |
chmod -R g+r "${PREFIX}" | |
find "${PREFIX}" -type d -exec chmod g+x {} \; | |
fi |
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