| index_by_id.json | |
| { | |
| '54561351531513' : { | |
| '@type': nidm:designMatrix | |
| 'attribut_1': 18 | |
| 'attribut_2': 'Design matrix' | |
| } | |
| '564561565413212' : { | |
| '@type': nidm:contrast |
| { | |
| "@context": { | |
| "DesignMatrix": "http://purl.org/nidash/nidm#DesignMatrix", | |
| "value": "http://path_to_prov#value", | |
| "regressorNames": "http://purl.org/nidash/nidm#regressorNames", | |
| "hasDriftModel": "http://purl.org/nidash/nidm#hasDriftModel", | |
| "SPMsDriftCutoffPeriod": "http://purl.org/nidash/spm#spm_SPMsDriftCutoffPeriod" | |
| }, | |
| "DesignMatrix": | |
| { |
| { | |
| "@context": { | |
| "DesignMatrix": "http://purl.org/nidash/nidm#DesignMatrix", | |
| "value": "http://path_to_prov#value", | |
| "regressorNames": "http://purl.org/nidash/nidm#regressorNames", | |
| "hasDriftModel": "http://purl.org/nidash/nidm#hasDriftModel", | |
| "SPMsDriftCutoffPeriod": "http://purl.org/nidash/spm#spm_SPMsDriftCutoffPeriod" | |
| }, | |
| "DesignMatrix": | |
| { |
| $ python Tests/testError.py | |
| Downloading data | |
| https://neurovault.org/collections/1692/fsl_con_f.nidm.zip | |
| https://neurovault.org/collections/1692/fsl_contrast_mask.nidm.zip | |
| https://neurovault.org/collections/1692/fsl_default.nidm.zip | |
| https://neurovault.org/collections/1692/fsl_full_examples001.nidm.zip | |
| https://neurovault.org/collections/1692/fsl_gamma_basis.nidm.zip | |
| https://neurovault.org/collections/1692/fsl_gaussian.nidm.zip | |
| https://neurovault.org/collections/1692/fsl_group_ols.nidm.zip | |
| https://neurovault.org/collections/1692/fsl_group_wls.nidm.zip |
| { | |
| "name": "ds114_example", | |
| "description": "An example of analysis using one run of ds114", | |
| "image_data": "fingerfootlips", | |
| "blocks": [ | |
| { | |
| "level": "participant", | |
| "inputs": { | |
| "dependent_variable": "fingerfootlips" | |
| }, |
| { | |
| "name": "one_sample_motor_bids_model", | |
| "description": "Example of the simplest BIDS model: group analysis of motor activations", | |
| "image_data": "motor", | |
| "blocks": [ | |
| { | |
| "level": "run", | |
| "model": { | |
| "predictors": ["motor"], | |
| "hrf_variables": "all" |
| cmaumet:nidmresults-examples_3 (spm_t_test-pr)$ GIT_TRACE=1 git lfs push --all origin spm_t_test-pr | |
| 15:28:45.317796 git.c:561 trace: exec: 'git-lfs' 'push' '--all' 'origin' 'spm_t_test-pr' | |
| 15:28:45.318402 run-command.c:334 trace: run_command: 'git-lfs' 'push' '--all' 'origin' 'spm_t_test-pr' | |
| trace git-lfs: Upload refs origin to remote [spm_t_test-pr] | |
| trace git-lfs: run_command: git rev-list --objects --do-walk spm_t_test-pr | |
| trace git-lfs: run_command: git cat-file --batch-check | |
| trace git-lfs: run_command: git cat-file --batch | |
| trace git-lfs: run_command: 'git' config -l | |
| trace git-lfs: tq: starting 3 transfer workers | |
| trace git-lfs: tq: running as batched queue, batch size of 100 |
| $ GIT_TRACE=1 git lfs push --all origin spm_t_test | |
| 16:12:54.928018 git.c:561 trace: exec: 'git-lfs' 'push' '--all' 'origin' 'spm_t_test' | |
| 16:12:54.928064 run-command.c:343 trace: run_command: 'git-lfs' 'push' '--all' 'origin' 'spm_t_test' | |
| trace git-lfs: Upload refs origin to remote [spm_t_test] | |
| trace git-lfs: run_command: git rev-list --objects --do-walk spm_t_test | |
| trace git-lfs: run_command: git cat-file --batch-check | |
| trace git-lfs: run_command: git cat-file --batch | |
| trace git-lfs: run_command: 'git' config -l | |
| trace git-lfs: tq: starting 3 transfer workers | |
| trace git-lfs: tq: running as batched queue, batch size of 100 |
This issue is open to discuss the definition of fsl:ContrastVariance.
Given that the "contrast variance" is a generic concept, I would suggest to move this term to the nidm namespace and, similarly to what we have done for other Map terms in #255, how about:
stato:"standard error of a contrast estimate").