General:
Tools | Description |
---|---|
flank | Create new intervals from the flanks of existing intervals. |
slop | Adjust the size of intervals. |
shift | Adjust the position of intervals. |
subtract | Remove intervals based on overlaps b/w two files. |
Search PubMed for articles in the PMC Open Access Subset for which free full text (i.e. XML) is available: | |
http://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi?db=pubmed&retmode=xml&term=pubmed+pmc+open+access%5Bfilter%5D+AND+free+full+text%5Bfilter%5D | |
Find the PMCID for an article by PMID: | |
http://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pubmed&db=pmc&retmode=xml&linkname=pubmed_pmc&id=24191168 | |
Fetch full text article XML from PMC by PMCID: | |
http://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pmc&id=3804407 | |
A PMC article for which the full text XML is not available: |
Thanks to @Adrian_H, @RoryKirchner, @genetics_blog, | |
@leonidkrugliak, @Graham_Coop, @yokofakun, | |
@pathogenomenick, @caseybergman, @Jalfoldi, | |
@Paul_R_Johnston, @gknoProject, @David_Dobbs, | |
@vsbuffalo, @robinhenig, @nccomfort, | |
@GholsonLyon, @notSoJunkDNA, @neilfws, | |
@rovingpencil, @rtraborn | |
In addition, please refer to Casey Bergman's collection of other books: | |
http://www.librarything.com/catalog/xylem&tag=genetics&collection=-1 |
#!/bin/bash | |
# A simple script to backup an organization's GitHub repositories. | |
#------------------------------------------------------------------------------- | |
# NOTES: | |
#------------------------------------------------------------------------------- | |
# * Under the heading "CONFIG" below you'll find a number of configuration | |
# parameters that must be personalized for your GitHub account and org. | |
# Replace the `<CHANGE-ME>` strings with the value described in the comments | |
# (or overwrite those values at run-time by providing environment variables). |