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Create a symbolic link to netlogo in /usr/bin: | |
cd /usr/bin | |
sudo ln -s ~/Downloads/netlogo-5.0.5/netlogo.sh netlogo | |
sudo updatedb | |
In the netlogo.sh file, override the default 'cd' command to point to the directory where the jar file (and the shell script) is: | |
cd ~/Downloads/netlogo-5.0.5 |