Created
July 7, 2018 09:08
-
-
Save ah89/766aeae857cc16d88ca8339c64b36167 to your computer and use it in GitHub Desktop.
flatten the the table
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
import csv | |
input_file_path = 'ehr_clean.csv' | |
output_file_name = 'ehr_clean_f.csv' | |
f = open(input_file_path) | |
csv_f = csv.reader(f) | |
rows = [] | |
for row in csv_f: | |
rows.append(row) | |
f.close() | |
col_names = rows[0] | |
rows.pop(0) | |
print col_names | |
f2 = open(output_file_name, 'w') | |
f2.write('tid,attr_name,attr_val\n') | |
index = 1 | |
for r in rows: | |
for (idx, el) in enumerate(r): | |
line = '{},{},{}\n'.format(str(index), col_names[idx], el) | |
f2.write(line) | |
index += 1 | |
f2.close() |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment