Created
November 12, 2021 12:18
-
-
Save MiCurry/dadf5a6760f806f3490de4509a2a301c to your computer and use it in GitHub Desktop.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| #!/usr/bin/env bash | |
| #PBS -N deposition_run | |
| #PBS -A NMMM0013 | |
| #PBS -l walltime=00:40:00 | |
| #PBS -q regular | |
| #PBS -j oe | |
| #PBS -l select=1:ncpus=36:mpiprocs=36 | |
| if [ $# -ne 3 ]; then | |
| echo "Usage: create_deposition.sh grid_alias ESMF/SCRIP-gridFile date" 1>&2 | |
| exit 1; | |
| fi | |
| short_grid_name=$1 | |
| mpas_grid_file=$2 # This can be either ESMF or SCRIP format | |
| datestr=$3 | |
| ulimit -s unlimited | |
| mapdir=`pwd` | |
| export MPI_TYPE_DEPTH=16 # Seems to be needed with netcdf-mpi module on Cheyenne | |
| module load gnu | |
| module load esmf_libs | |
| module load esmf-8.0.0-ncdfio-mpi-O | |
| module load nco/4.7.9 | |
| export srcgrid=0.23x0.31 | |
| export srcgridfile=/glade/p/cesmdata/inputdata/share/scripgrids/fv0.23x0.31_141008.nc | |
| export srcinitfile=/glade/p/cesmdata/inputdata/atm/cam/chem/trop_mam/atmsrf_0.23x0.31_181018.nc | |
| export dstinitfile=atmsrf_${short_grid_name}_${datestr}.nc | |
| echo "create_deposition: Creating mapping file between ${srcgridfile} and ${mpas_grid_file}" | |
| ESMF_RegridWeightGen --64bit_offset --ignore_unmapped -m bilinear --dst_loc center -w map_${srcgrid}_to_${short_grid_name}_blin.nc -s ${srcgridfile} -d ${mpas_grid_file} | |
| if [ $? -ne 0 ]; then | |
| echo "ERROR: Error when generating map between ${srcgridfile} and ${mpas_grid_file}" | |
| exit 1; | |
| fi | |
| echo "create_deposition: Creating remapping of ${srcinitfile} to ${mpas_grid_file} using map_${srcgrid}_to_${short_grid_name}_blin.nc" | |
| #use the mapfile to remap srcinitfile to dstinitfile | |
| ncremap -6 -m ./map_${srcgrid}_to_${short_grid_name}_blin.nc -i ${srcinitfile} -o ${dstinitfile} | |
| if [ $? -ne 0 ]; then | |
| echo "ERROR: Error when generating map between ${srcgridfile} and ${mpas_grid_file}" | |
| exit 1; | |
| fi | |
| echo "create_deposition: Remapped deposition file succsfully ${dstinitfile}" | |
| echo "create_deposition: Removing temporary mapping file map_${srcgrid}_to_${short_grid_name}_blin.nc..." | |
| rm map_${srcgrid}_to_${short_grid_name}_blin.nc |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment