GROMACS Quick and dirty installation:
Commands sequence:
tar xfz gromacs-2023.3.tar.gz
cd gromacs-2023.3
mkdir build
cd build
cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
make
make check
Commands sequence:
tar xfz gromacs-2023.3.tar.gz
cd gromacs-2023.3
mkdir build
cd build
cmake .. -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON
make
make check
digraph
{
# start & end nodes
Contents of conda_pkg_deps.sh
:
#!/bin/sh
#
# Find which package in the conda package cache requires the given package.
# To be run in home folder:~$
The easiest way I found to create an empty file in Windows 10 like touch
in Linux:
>cd . > filename.ext
Update: A simpler alternative is to install nb_conda_kernels, which makes accessible all defined environments.
Two commands to run when creating a new env:
# 1. Env creation: always include ipykernel (could be place in .condarc)
conda create --name env310 python=3.10 ipykernel numpy
# 2. Kernel installation: makes env available in jupyter's kernels list
python -m ipykernel install --user --name=env310 --display-name "py310"
Using the Anaconda Prompt
on a Windows 10 system:
This is the conda
command that creates a new environment with only python installed while excluding
any listed packages under the create_default_packages
section of user root folder\.condarc
:
(base) [PS1]>conda create -n bare310 --no-default-packages python=3.10
The output (minus a few blank lines):
Collecting package metadata (current_repodata.json): done
Code source: DETR_panoptic notebook on colab
i
will end (because out["pred_masks"][keep]
was
not saved into a variable, hence we can't access its length).#[...]
import matplotlib.pyplot as plt
sandwich_list = [
'Lobster roll',
'Chicken caesar',
I used to command line version given in this SO post to upgrade my current git version:
(base) C:\Users\me>git --version
git version 2.34.1.windows.1
(base) C:\Users\me>git update-git-for-windows